deeplotyper.vcf_haploeventsΒΆ

Functions

lru_cache([maxsize, typed])

Least-recently-used cache decorator.

Classes

HaplotypeEvent(pos0, ref_allele, alt_seq)

A single variant event relative to a reference haplotype.

HaplotypeGroups(pattern_to_samples, ref_seq, ...)

Groups of samples sharing identical haplotype event patterns.

Path(*args, **kwargs)

PurePath subclass that can make system calls.

defaultdict

defaultdict(default_factory=None, /, [...]) --> dict with default factory